Index

B | C | E | G | H | L | M | N | P | R | S | T | W

B

build_reference() (in module stangene.references)

C

classify_features() (in module stangene.classify)

E

ensembl_prefix (stangene.species.SpeciesConfig attribute)

G

generate_markdown_report() (in module stangene.report)

get_species_config() (in module stangene.species)

H

HarmonizationResult (class in stangene.harmonize)

harmonize() (in module stangene.harmonize)

L

load_features() (in module stangene.io)

load_reference() (in module stangene.references)

M

N

name (stangene.species.SpeciesConfig attribute)

naming_convention (stangene.species.SpeciesConfig attribute)

P

provenance (stangene.merge.MergeResult attribute)

R

reference_sources (stangene.species.SpeciesConfig attribute)

S

SpeciesConfig (class in stangene.species)
stangene.classify
- module
stangene.harmonize
- module
stangene.io
- module
stangene.merge
- module

stangene.references
- module
stangene.report
- module
stangene.species
- module
stats (stangene.harmonize.HarmonizationResult attribute)
summary() (in module stangene.report)

T

transcript_prefix (stangene.species.SpeciesConfig attribute)

W

write_reports() (in module stangene.report)

write_results() (in module stangene.io)