stangene.harmonize¶

The core harmonization cascade.

Tiered harmonization cascade for gene identifier mapping.

class stangene.harmonize.HarmonizationResult(mapping_table, conflicts, stats)[source]¶

Bases: object

Result of the harmonization cascade.

mapping_table: DataFrame¶

conflicts: DataFrame¶

stats: dict¶

stangene.harmonize.harmonize(ft, ref)[source]¶

Return type:: HarmonizationResult